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Instrumental Analysis

Mass spectra and molecular structure

  • 3 things to know
  • Components 1 and 2

Overview

Molecular ion, base peak in a mass spectrum and what happens during fragmentation in a mass spectrometer.

What you need to know

Answer each one before you reveal it.

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Key term

Which species are detected in a mass spectrometer?

Key term

What is meant by the base peak in a mass spectrum?

Key term

Explain what happens during fragmentation in a mass spectrometer.

Questions from this subtopic

Each one with the model answer underneath.

  1. 1

    Which species are detected in a mass spectrometer?

    Model answer

    Only positively charged ions are detected, because the instrument separates and counts ions by deflecting them.

  2. 2

    What is the molecular ion?

    Model answer

    The molecular ion is the ion formed when a whole molecule loses a single electron, so it has the same mass as the molecule itself.

  3. 3

    Where is the molecular ion peak found in a mass spectrum, and what does it tell you?

    Model answer

    It is the peak at the highest mass to charge ratio apart from small isotope peaks beyond it, and its position gives the relative molecular mass of the compound.

  4. 4

    What is meant by the base peak in a mass spectrum?

    Model answer

    The base peak is the tallest peak, produced by the most abundant ion, which is usually the most stable fragment.

  5. 5

    Explain what happens during fragmentation in a mass spectrometer.

    Model answer

    The molecular ion has enough energy to break apart into a smaller positive ion and a neutral radical, and only the positive fragment is recorded.

  6. 6

    Name the fragment ion responsible for a peak at a mass to charge ratio of 15.

    Model answer

    It is the methyl cation, CH₃⁺.

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